Predict Day 1 CFU from Day 0 Community

Predict Day 1 CFU from Day 1 Community

Predict Day 2 CFU from Day 0 Community

Predict Day 2 CFU from Day 2 Community

Predict Day 3 CFU from Day 0 Community

Predict Day 3 CFU from Day 3 Community

Predict Day 4 CFU from Day 0 Community

Predict Day 4 CFU from Day 4 Community

Predict Day 5 CFU from Day 0 Community

Predict Day 5 CFU from Day 5 Community

Predict Day 6 CFU from Day 0 Community

Predict Day 6 CFU from Day 6 Community

Predict Day 7 CFU from Day 0 Community

Predict Day 7 CFU from Day 7 Community

Predict Day 8 CFU from Day 0 Community

Predict Day 8 CFU from Day 8 Community

Predict Day 9 CFU from Day 0 Community

Predict Day 9 CFU from Day 9 Community

Predict Day 10 CFU from Day 0 Community

Predict Day 10 CFU from Day 10 Community

Modeled with OTUs with max rel abund > 1% (216 OTUs) When modeling based on mean rel abund > 1% (22 OTUs), R^2 decreases ~0.1 and MSE increases ~ 1 and lose all coriobacteriaceae/Actinobacteria

Otus associated with CFU C difficile and same day OTU

Day 0 OTUs associated with C difficile CFU